Sam_g29897


Description : not classified & original description: none


Gene families : OG0006632 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006632_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g29897
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00233820 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT3G27180 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.03 OrthoFinder output from all 47 species
Adi_g086095 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0288.g063238 No alias not classified & original description: CDS=107-2203 0.03 OrthoFinder output from all 47 species
Ceric.04G110700.1 Ceric.04G110700 not classified & original description: pacid=50631634... 0.05 OrthoFinder output from all 47 species
Dcu_g37117 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g23209 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033109001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01033112001 No alias No description available 0.01 OrthoFinder output from all 47 species
LOC_Os01g69120.1 LOC_Os01g69120 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g20894 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g40807 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32626 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g005010.4.1 Solyc03g005010 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g24259 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e028451_P001 Zm00001e028451 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004743 pyruvate kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
MF GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
MF GO:0030955 potassium ion binding IEP HCCA
MF GO:0031420 alkali metal ion binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
MF GO:0042586 peptide deformylase activity IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!