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  5. Sam_g29814

Sam_g29814


Description : not classified & original description: none


Gene families : OG0005058 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005058_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g29814

Target Alias Description ECC score Gene Family Method Actions
Aev_g48678 No alias splicing factor *(RGH3) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13027 No alias splicing factor *(RGH3) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g51867 No alias splicing factor *(RGH3) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 33 87
IPR000571 Znf_CCCH 97 124
No external refs found!