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  5. Sam_g29772

Sam_g29772


Description : Rab GTPase-activating protein *(RabGAP9) & original description: none


Gene families : OG0003016 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003016_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g29772
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
Ala_g01753 No alias Rab GTPase-activating protein *(RabGAP9) & original... 0.02 OrthoFinder output from all 47 species
Aop_g10761 No alias Rab GTPase-activating protein *(RabGAP9) & original... 0.03 OrthoFinder output from all 47 species
Aop_g31164 No alias Rab GTPase-activating protein *(RabGAP9) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene21270.t1 Aspi01Gene21270 Rab GTPase-activating protein *(RabGAP9) & original... 0.03 OrthoFinder output from all 47 species
Cba_g43177 No alias Rab GTPase-activating protein *(RabGAP9) & original... 0.01 OrthoFinder output from all 47 species
Dac_g04145 No alias Rab GTPase-activating protein *(RabGAP9) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g08206 No alias Rab GTPase-activating protein *(RabGAP9) & original... 0.02 OrthoFinder output from all 47 species
LOC_Os08g25010.1 LOC_Os08g25010 RAB-GTPase-activating protein (RAB-GAP) 0.01 OrthoFinder output from all 47 species
Lfl_g08712 No alias Rab GTPase-activating protein *(RabGAP9) & original... 0.04 OrthoFinder output from all 47 species
Nbi_g19686 No alias Rab GTPase-activating protein *(RabGAP9) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g22196 No alias Rab GTPase-activating protein *(RabGAP9) & original... 0.02 OrthoFinder output from all 47 species
Spa_g09561 No alias Rab GTPase-activating protein *(RabGAP9) & original... 0.06 OrthoFinder output from all 47 species
Zm00001e022149_P001 Zm00001e022149 RAB-GTPase-activating protein (RAB-GAP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0009975 cyclase activity IEP HCCA
MF GO:0009976 tocopherol cyclase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000195 Rab-GTPase-TBC_dom 161 368
No external refs found!