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  5. Sam_g29722

Sam_g29722


Description : not classified & original description: none


Gene families : OG0005211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005211_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g29722

Target Alias Description ECC score Gene Family Method Actions
Als_g59368 FAS4, ATFAS4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09640 FAS4, ATFAS4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g27239 FAS4, ATFAS4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp4g04560.1 FAS4, ATFAS4 ATP-dependent RNA helicase DEAH13 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Tin_g09770 FAS4, ATFAS4 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
CC GO:0032039 integrator complex IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 393 563
IPR001650 Helicase_C 763 851
IPR007502 Helicase-assoc_dom 913 995
IPR011709 DEAD-box_helicase_OB_fold 1124 1216
No external refs found!