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Sam_g29562


Description : component *(VPS51/UNH) of GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes & original description: none


Gene families : OG0003991 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003991_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g29562

Target Alias Description ECC score Gene Family Method Actions
Als_g19919 No alias component *(VPS51/UNH) of GARP/EARP... 0.03 OrthoFinder output from all 47 species
Dcu_g16393 No alias component *(VPS51/UNH) of GARP/EARP... 0.02 OrthoFinder output from all 47 species
LOC_Os03g52770.1 LOC_Os03g52770 component VPS51/UNH of GARP/EARP... 0.02 OrthoFinder output from all 47 species
Mp6g05400.1 No alias component VPS51/UNH of GARP/EARP... 0.02 OrthoFinder output from all 47 species
Zm00001e012075_P003 Zm00001e012075 component VPS51/UNH of GARP/EARP... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR039481 EXOC2/Sec5_N_dom 40 240
No external refs found!