Sam_g29482

Description : Qa-type SYP2-group component of SNARE membrane fusion complex & original description: none

Gene families : OG0001469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001469_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g29482
Cluster	HCCA: Cluster_44

Target	Alias	Description	ECC score	Gene Family Method
Ceric.16G078800.1	SYP21, ATSYP21,...	Qa-type SYP2-group component of SNARE membrane fusion...	0.02	OrthoFinder output from all 47 species
Len_g15100	SYP21, ATSYP21,...	Qa-type SYP2-group component of SNARE membrane fusion...	0.02	OrthoFinder output from all 47 species
Mp8g15260.1	VAM3, ATVAM3,...	SYP2-group Qa-type SNARE component	0.02	OrthoFinder output from all 47 species
Solyc08g005200.3.1	VAM3, ATVAM3,...	SYP2-group Qa-type SNARE component	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000727	T_SNARE_dom	214	265
IPR006011	Syntaxin_N	27	127

External Links

No external refs found!