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  5. Lfl_g28304

Lfl_g28304 (RHC1A)


Aliases : RHC1A

Description : RING-H2-class BTL-subclass E3 ubiquitin ligase & original description: none


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g28304

Target Alias Description ECC score Gene Family Method Actions
AT3G13430 No alias RING/U-box superfamily protein 0.01 OrthoFinder output from all 47 species
Aev_g01231 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g03172 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08904 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g46210 No alias not classified & original description: none 0.25 OrthoFinder output from all 47 species
Aob_g01998 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Aob_g03358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58136.t1 Aspi01Gene58136 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0185.g056585 No alias not classified & original description: CDS=1-1950 0.07 OrthoFinder output from all 47 species
Cba_g67617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09357 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.08 OrthoFinder output from all 47 species
Dde_g51480 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06840 RHC1A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27311 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015309001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Gb_26865 No alias E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_10435153g0010 No alias E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_19897g0010 No alias E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g10979 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Msp_g25713 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g29204 RHC1A RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ppi_g56162 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000146 No alias not classified & original description: CDS=228-1322 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012146 No alias not classified & original description: CDS=1-969 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012286 No alias not classified & original description: CDS=1-1674 0.01 OrthoFinder output from all 47 species
Sam_g17099 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g20368 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g08969 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e016135_P001 Zm00001e016135 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 128 170
No external refs found!