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  5. Sam_g29412

Sam_g29412


Description : TOR-dependent regulatory protein *(MRF) of protein translation & original description: none


Gene families : OG0002034 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002034_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g29412

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00116560 evm_27.TU.AmTr_v1... Multi-process regulation.TOR signalling pathway.MRF... 0.04 OrthoFinder output from all 47 species
AT3G48390 No alias MA3 domain-containing protein 0.03 OrthoFinder output from all 47 species
AT5G63190 No alias MA3 domain-containing protein 0.03 OrthoFinder output from all 47 species
Adi_g019079 No alias TOR-dependent regulatory protein *(MRF) of protein... 0.02 OrthoFinder output from all 47 species
Cba_g17267 No alias TOR-dependent regulatory protein *(MRF) of protein... 0.02 OrthoFinder output from all 47 species
Ore_g20899 No alias TOR-dependent regulatory protein *(MRF) of protein... 0.02 OrthoFinder output from all 47 species
Solyc03g111640.4.1 Solyc03g111640 S6K-dependent protein translation regulator (MRF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003891 Initiation_fac_eIF4g_MI 285 394
IPR003891 Initiation_fac_eIF4g_MI 588 695
IPR003891 Initiation_fac_eIF4g_MI 121 231
IPR003891 Initiation_fac_eIF4g_MI 424 534
No external refs found!