Sam_g29404


Description : not classified & original description: none


Gene families : OG0000214 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000214_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g29404

Target Alias Description ECC score Gene Family Method Actions
AT2G02480 STI AAA-type ATPase family protein 0.02 OrthoFinder output from all 47 species
Adi_g036147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086827 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g39960 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11931 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g23650 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03898 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15002 STI not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g15567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62844 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g25756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26117 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17354 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene13755.t1 STI, Aspi01Gene13755 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64618.t1 STI, Aspi01Gene64618 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0019.g015008 STI not classified & original description: CDS=518-3727 0.05 OrthoFinder output from all 47 species
Azfi_s0055.g034013 STI not classified & original description: CDS=1-4041 0.04 OrthoFinder output from all 47 species
Azfi_s0377.g067305 STI not classified & original description: CDS=1-3390 0.02 OrthoFinder output from all 47 species
Cba_g12073 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12772 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g14646 STI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g22371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g26969 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G098800.1 Ceric.05G098800 not classified & original description: pacid=50577725... 0.02 OrthoFinder output from all 47 species
Ceric.18G081700.1 STI, Ceric.18G081700 not classified & original description: pacid=50622228... 0.03 OrthoFinder output from all 47 species
Ceric.19G039400.1 Ceric.19G039400 not classified & original description: pacid=50576420... 0.03 OrthoFinder output from all 47 species
Ceric.23G075900.1 STI, Ceric.23G075900 not classified & original description: pacid=50610074... 0.03 OrthoFinder output from all 47 species
Ceric.24G034100.1 Ceric.24G034100 not classified & original description: pacid=50629928... 0.03 OrthoFinder output from all 47 species
Dac_g01794 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05768 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g09568 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g30782 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01007580001 No alias Protein STICHEL-like 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01023130001 STI Protein STICHEL OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os08g02670.1 LOC_Os08g02670 Protein STICHEL-like 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os11g13990.1 STI, LOC_Os11g13990 Protein STICHEL OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os12g10670.1 STI, LOC_Os12g10670 Protein STICHEL OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os12g19180.1 LOC_Os12g19180 Protein STICHEL-like 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g14237 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04286 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05036 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30222 STI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp1g13040.1 STI Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g13342 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07626 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g08449 STI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08790 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g13658 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25300 STI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g39999 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11006 STI not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g61848 STI not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008500 No alias iron-sulphur component *(SDH2) of succinate... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010327 No alias not classified & original description: CDS=516-4208 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s3431.g028773 No alias not classified & original description: CDS=1-498 0.03 OrthoFinder output from all 47 species
Sam_g07965 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g40503 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo2945 STI Protein STICHEL OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo420117 No alias Protein STICHEL-like 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc01g102810.3.1 STI, Solyc01g102810 Protein STICHEL OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g04713 STI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g12357 STI not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g01269 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09165 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11201 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e032180_P001 Zm00001e032180 Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e039775_P001 STI, Zm00001e039775 Protein STICHEL OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!