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  5. Sam_g29401

Sam_g29401


Description : Fibrillin plastoglobule core protein *(FBN1/2) & original description: none


Gene families : OG0002240 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002240_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g29401

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00085290 evm_27.TU.AmTr_v1... Plastid lipid-associated protein 3, chloroplastic... 0.03 OrthoFinder output from all 47 species
AT2G35490 No alias Plastid-lipid associated protein PAP / fibrillin family protein 0.04 OrthoFinder output from all 47 species
Adi_g113977 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.04 OrthoFinder output from all 47 species
Adi_g113978 No alias Fibrillin plastoglobule core protein *(FBN1/2) &... 0.02 OrthoFinder output from all 47 species
Aev_g10976 No alias Fibrillin plastoglobule core protein *(FBN1/2) &... 0.08 OrthoFinder output from all 47 species
Ala_g03723 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.02 OrthoFinder output from all 47 species
Als_g02332 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.08 OrthoFinder output from all 47 species
Aob_g19875 No alias Fibrillin plastoglobule core protein *(FBN1/2) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene48670.t1 FIB, Aspi01Gene48670 Fibrillin plastoglobule core protein *(FBN1/2) &... 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000159 No alias Fibrillin plastoglobule core protein *(FBN1/2) &... 0.08 OrthoFinder output from all 47 species
Cba_g01687 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.05 OrthoFinder output from all 47 species
Ceric.12G091200.1 FIB, Ceric.12G091200 Fibrillin plastoglobule core protein *(FBN1/2) &... 0.05 OrthoFinder output from all 47 species
Dac_g17027 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.04 OrthoFinder output from all 47 species
Dde_g12841 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.02 OrthoFinder output from all 47 species
Ehy_g08272 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.04 OrthoFinder output from all 47 species
Ehy_g24089 No alias Fibrillin plastoglobule core protein *(FBN8) & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01013072001 No alias Probable plastid-lipid-associated protein 3,... 0.03 OrthoFinder output from all 47 species
LOC_Os10g42500.1 LOC_Os10g42500 Probable plastid-lipid-associated protein 3,... 0.02 OrthoFinder output from all 47 species
MA_10031049g0010 No alias Probable plastid-lipid-associated protein 3,... 0.04 OrthoFinder output from all 47 species
MA_153977g0010 No alias Plastid-lipid-associated protein, chloroplastic... 0.05 OrthoFinder output from all 47 species
MA_28715g0010 No alias Light-induced protein, chloroplastic OS=Solanum... 0.04 OrthoFinder output from all 47 species
Ppi_g09162 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.04 OrthoFinder output from all 47 species
Spa_g08959 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.06 OrthoFinder output from all 47 species
Spa_g25316 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.07 OrthoFinder output from all 47 species
Tin_g21553 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.09 OrthoFinder output from all 47 species
Zm00001e002454_P001 Zm00001e002454 Probable plastid-lipid-associated protein 3,... 0.04 OrthoFinder output from all 47 species
Zm00001e007939_P001 Zm00001e007939 Probable plastid-lipid-associated protein 2,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0046422 violaxanthin de-epoxidase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006843 PAP/fibrillin_dom 107 322
No external refs found!