Sam_g29302

Description : TATA box-binding protein-associated factor *(MOT1) & original description: none

Gene families : OG0004296 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004296_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g29302

Target	Alias	Description	ECC score	Gene Family Method
AT3G54280	BTAF1, RGD3,...	DNA binding;ATP binding;nucleic acid...	0.05	OrthoFinder output from all 47 species
Adi_g011708	BTAF1, RGD3,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g086270	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.02	OrthoFinder output from all 47 species
Aev_g04198	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.03	OrthoFinder output from all 47 species
Als_g16472	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.04	OrthoFinder output from all 47 species
Aop_g70865	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene60693.t1	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.03	OrthoFinder output from all 47 species
Azfi_s0014.g013488	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.03	OrthoFinder output from all 47 species
Cba_g23640	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.05	OrthoFinder output from all 47 species
Ceric.27G041200.1	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.05	OrthoFinder output from all 47 species
Cre16.g687301	BTAF1, RGD3,...	RNA biosynthesis.RNA polymerase II-dependent...	0.02	OrthoFinder output from all 47 species
Dcu_g03219	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.04	OrthoFinder output from all 47 species
Dde_g14787	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.03	OrthoFinder output from all 47 species
Ehy_g09279	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.04	OrthoFinder output from all 47 species
GSVIVT01019359001	BTAF1, RGD3,...	RNA biosynthesis.RNA polymerase II-dependent...	0.04	OrthoFinder output from all 47 species
Gb_19667	BTAF1, RGD3,...	chromatin remodeling factor (Mot1). TATA box-binding...	0.07	OrthoFinder output from all 47 species
LOC_Os02g06588.1	BTAF1, RGD3,...	chromatin remodeling factor (Mot1). TATA box-binding...	0.06	OrthoFinder output from all 47 species
LOC_Os02g06592.1	BTAF1, RGD3,...	chromatin remodeling factor (Mot1). TATA box-binding...	0.04	OrthoFinder output from all 47 species
Lfl_g35777	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.06	OrthoFinder output from all 47 species
MA_10430482g0010	BTAF1, RGD3,...	TATA-binding protein-associated factor BTAF1...	0.03	OrthoFinder output from all 47 species
MA_79681g0010	BTAF1, RGD3,...	chromatin remodeling factor (Mot1). TATA box-binding...	0.03	OrthoFinder output from all 47 species
Mp6g18490.1	BTAF1, RGD3,...	chromatin remodeling factor (Mot1). TATA box-binding...	0.04	OrthoFinder output from all 47 species
Ore_g19191	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.03	OrthoFinder output from all 47 species
Pir_g09833	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.05	OrthoFinder output from all 47 species
Ppi_g03292	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.03	OrthoFinder output from all 47 species
Smo186944	BTAF1, RGD3,...	RNA biosynthesis.RNA polymerase II-dependent...	0.03	OrthoFinder output from all 47 species
Solyc08g074500.2.1	BTAF1, RGD3,...	chromatin remodeling factor (Mot1). TATA box-binding...	0.03	OrthoFinder output from all 47 species
Solyc08g074510.1.1	BTAF1, RGD3,...	TATA-binding protein-associated factor BTAF1...	0.02	OrthoFinder output from all 47 species
Solyc08g074520.2.1	BTAF1, RGD3,...	TATA-binding protein-associated factor BTAF1...	0.03	OrthoFinder output from all 47 species
Spa_g08445	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.04	OrthoFinder output from all 47 species
Tin_g13188	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.03	OrthoFinder output from all 47 species
Zm00001e032564_P001	BTAF1, RGD3,...	chromatin remodeling factor (Mot1). TATA box-binding...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008094	ATP-dependent activity, acting on DNA	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEA	Interproscan
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
MF	GO:0035091	phosphatidylinositol binding	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR022707	Mot1_central_dom	787	1238
IPR000330	SNF2_N	1471	1768
IPR001650	Helicase_C	1829	1931

External Links

No external refs found!

Sam_g29302

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation