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  5. Sam_g29298

Sam_g29298


Description : anion transporter *(NRT1/PTR) & original description: none


Gene families : OG0004874 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004874_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g29298

Target Alias Description ECC score Gene Family Method Actions
Aev_g28647 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g32468 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010448 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: CDS=61-2064 0.03 OrthoFinder output from all 47 species
Ceric.06G064700.1 Ceric.06G064700 anion transporter *(NRT1/PTR) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.1Z172800.1 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.35G009100.1 PTR1, ATPTR1,... anion transporter *(NRT1/PTR) & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g11385 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g36044 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g12451 PTR5, ATPTR5 anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g20249 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g31718 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g54534 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0223.g026257 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: CDS=1-1758 0.02 OrthoFinder output from all 47 species
Tin_g19118 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR000109 POT_fam 140 538
No external refs found!