Sam_g29251

Description : EC_2.4 glycosyltransferase & original description: none

Gene families : OG0000112 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g29251

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00014p00028520	evm_27.TU.AmTr_v1...	No description available	0.02	OrthoFinder output from all 47 species
AT1G06490	GSL7, ATGSL07,...	glucan synthase-like 7	0.02	OrthoFinder output from all 47 species
AT3G14780	No alias	CONTAINS InterPro DOMAIN/s: Transposase, Ptta/En/Spm,...	0.03	OrthoFinder output from all 47 species
Adi_g102045	ATGSL10, gsl10, CALS9	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g28221	ATGSL10, gsl10, CALS9	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Als_g49570	gsl12, ATGSL12	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g05730	ATGSL01, GSL01,...	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g08289	GLS2, ATGSL02, CALS5	EC_2.4 glycosyltransferase & original description: none	0.05	OrthoFinder output from all 47 species
Aop_g21799	GSL5, PMR4,...	EC_2.4 glycosyltransferase & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene07801.t2	ATGSL10, gsl10,...	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene47172.t1	GSL5, PMR4,...	EC_2.4 glycosyltransferase & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene51007.t1	GLS2, ATGSL02,...	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0005.g009086	ATGSL01, GSL01,...	EC_2.4 glycosyltransferase & original description: CDS=1-5394	0.04	OrthoFinder output from all 47 species
Azfi_s0018.g014936	GSL5, PMR4,...	EC_2.4 glycosyltransferase & original description: CDS=1-5658	0.04	OrthoFinder output from all 47 species
Azfi_s1136.g097990	gsl12, ATGSL12	EC_2.4 glycosyltransferase & original description: CDS=1-3858	0.04	OrthoFinder output from all 47 species
Cba_g06816	GLS2, ATGSL02, CALS5	EC_2.4 glycosyltransferase & original description: none	0.01	OrthoFinder output from all 47 species
Cba_g06886	gsl12, ATGSL12	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cre03.g185000	ATGSL10, gsl10, CALS9	Cell wall.callose.callose synthase	0.01	OrthoFinder output from all 47 species
Dcu_g05842	GSL5, PMR4,...	EC_2.4 glycosyltransferase & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g46282	ATGSL10, gsl10, CALS9	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g15465	GSL5, PMR4,...	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g27829	GSL03, ATGSL3, ATGSL03	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01000622001	GSL04, atgsl4,...	Cell wall.callose.callose synthase	0.02	OrthoFinder output from all 47 species
GSVIVT01020854001	GSL7, ATGSL07,...	Cell wall.callose.callose synthase	0.02	OrthoFinder output from all 47 species
LOC_Os02g14900.1	GSL04, atgsl4,...	callose synthase	0.02	OrthoFinder output from all 47 species
LOC_Os06g08380.1	GLS2, ATGSL02,...	callose synthase	0.02	OrthoFinder output from all 47 species
LOC_Os06g51270.1	gsl12, ATGSL12,...	callose synthase	0.03	OrthoFinder output from all 47 species
Len_g09371	gsl12, ATGSL12	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Len_g10457	ATGSL01, GSL01,...	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Len_g14717	ATGSL10, gsl10, CALS9	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g12587	GLS2, ATGSL02, CALS5	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g15686	ATGSL01, GSL01,...	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g23513	ATGSL10, gsl10, CALS9	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
MA_10431631g0010	gsl12, ATGSL12	Enzyme classification.EC_2 transferases.EC_2.4...	0.02	OrthoFinder output from all 47 species
Mp3g24830.1	GLS2, ATGSL02, CALS5	callose synthase	0.02	OrthoFinder output from all 47 species
Msp_g19113	GSL5, PMR4,...	EC_2.4 glycosyltransferase & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g13418	ATGSL01, GSL01,...	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g23902	ATGSL10, gsl10, CALS9	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g36086	ATGSL10, gsl10, CALS9	EC_2.4 glycosyltransferase & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g51529	ATGSL01, GSL01,...	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g59350	ATGSL08, ATGSL8,...	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g60182	ATGSL10, gsl10, CALS9	EC_2.4 glycosyltransferase & original description: none	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006151	ATGSL10, gsl10, CALS9	EC_2.4 glycosyltransferase & original description: CDS=122-5707	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0052.g014030	ATGSL08, ATGSL8,...	EC_2.4 glycosyltransferase & original description: CDS=153-5618	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0091.g018794	GLS2, ATGSL02, CALS5	EC_2.4 glycosyltransferase & original description: CDS=579-6110	0.04	OrthoFinder output from all 47 species
Sam_g12310	No alias	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Solyc07g061920.4.1	GSL04, atgsl4,...	callose synthase	0.03	OrthoFinder output from all 47 species
Solyc11g005980.3.1	GLS2, ATGSL02,...	callose synthase	0.03	OrthoFinder output from all 47 species
Spa_g36878	GSL5, PMR4,...	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g39766	gsl12, ATGSL12	EC_2.4 glycosyltransferase & original description: none	0.01	OrthoFinder output from all 47 species
Zm00001e016298_P001	GSL06, ATGSL06,...	callose synthase	0.02	OrthoFinder output from all 47 species
Zm00001e019786_P001	ATGSL01, GSL01,...	callose synthase	0.03	OrthoFinder output from all 47 species
Zm00001e020194_P001	GSL5, PMR4,...	callose synthase	0.01	OrthoFinder output from all 47 species
Zm00001e020771_P004	GSL7, ATGSL07,...	callose synthase	0.02	OrthoFinder output from all 47 species
Zm00001e020789_P002	GSL7, ATGSL07,...	callose synthase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0000148	1,3-beta-D-glucan synthase complex	IEA	Interproscan
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003843	1,3-beta-D-glucan synthase activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0006074	(1->3)-beta-D-glucan metabolic process	None	Extended
BP	GO:0006075	(1->3)-beta-D-glucan biosynthetic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098797	plasma membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0030246	carbohydrate binding	IEP	HCCA
MF	GO:0030247	polysaccharide binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003440	Glyco_trans_48	69	732

External Links

No external refs found!

Sam_g29251

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation