Sam_g29064


Description : component *(ASI1) of ASI1-AIPP1-EDM2 chromatin silencing regulator complex & original description: none


Gene families : OG0002301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002301_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g29064
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
AT5G11470 No alias bromo-adjacent homology (BAH) domain-containing protein 0.02 OrthoFinder output from all 47 species
Aev_g26276 No alias component *(ASI1) of ASI1-AIPP1-EDM2 chromatin silencing... 0.03 OrthoFinder output from all 47 species
Aob_g07334 No alias component *(ASI1) of ASI1-AIPP1-EDM2 chromatin silencing... 0.02 OrthoFinder output from all 47 species
Ceric.1Z070700.1 Ceric.1Z070700 component *(ASI1) of ASI1-AIPP1-EDM2 chromatin silencing... 0.02 OrthoFinder output from all 47 species
Dac_g16211 No alias component *(ASI1) of ASI1-AIPP1-EDM2 chromatin silencing... 0.02 OrthoFinder output from all 47 species
Tin_g06037 No alias component *(ASI1) of ASI1-AIPP1-EDM2 chromaTin silencing... 0.02 OrthoFinder output from all 47 species
Tin_g10317 No alias component *(ASI1) of ASI1-AIPP1-EDM2 chromaTin silencing... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
CC GO:0030289 protein phosphatase 4 complex IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR001025 BAH_dom 52 164
No external refs found!