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  5. Sam_g29018

Sam_g29018


Description : not classified & original description: none


Gene families : OG0000470 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000470_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g29018

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00142280 CER3, WAX2, YRE,... Cell wall.cutin and suberin.cuticular lipid... 0.03 OrthoFinder output from all 47 species
AMTR_s00067p00188650 CER1,... Cell wall.cutin and suberin.cuticular lipid... 0.02 OrthoFinder output from all 47 species
AT5G57800 CER3, WAX2, YRE, FLP1 Fatty acid hydroxylase superfamily 0.04 OrthoFinder output from all 47 species
Als_g01038 CER3, WAX2, YRE, FLP1 aldehyde-generating component *(CER3) of CER1-CER3... 0.04 OrthoFinder output from all 47 species
Aop_g01795 CER3, WAX2, YRE, FLP1 aldehyde-generating component *(CER3) of CER1-CER3... 0.03 OrthoFinder output from all 47 species
Aop_g18595 CER1 aldehyde decarbonylase component *(CER1) of CER1-CER3... 0.03 OrthoFinder output from all 47 species
Aop_g28968 CER1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25539.t1 CER1, Aspi01Gene25539 aldehyde decarbonylase component *(CER1) of CER1-CER3... 0.02 OrthoFinder output from all 47 species
Azfi_s0012.g012810 CER3, WAX2, YRE, FLP1 aldehyde-generating component *(CER3) of CER1-CER3... 0.04 OrthoFinder output from all 47 species
Azfi_s0335.g065506 CER3, WAX2, YRE, FLP1 aldehyde-generating component *(CER3) of CER1-CER3... 0.03 OrthoFinder output from all 47 species
Cba_g26230 CER3, WAX2, YRE, FLP1 aldehyde-generating component *(CER3) of CER1-CER3... 0.03 OrthoFinder output from all 47 species
Ceric.20G054600.1 CER3, WAX2, YRE,... aldehyde-generating component *(CER3) of CER1-CER3... 0.04 OrthoFinder output from all 47 species
Dcu_g13038 CER3, WAX2, YRE, FLP1 aldehyde-generating component *(CER3) of CER1-CER3... 0.03 OrthoFinder output from all 47 species
Dcu_g18033 CER1 aldehyde decarbonylase component *(CER1) of CER1-CER3... 0.04 OrthoFinder output from all 47 species
Dde_g46392 CER1 aldehyde decarbonylase component *(CER1) of CER1-CER3... 0.03 OrthoFinder output from all 47 species
Dde_g48957 CER1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05891 CER3, WAX2, YRE, FLP1 aldehyde-generating component *(CER3) of CER1-CER3... 0.03 OrthoFinder output from all 47 species
GSVIVT01018419001 CER1 Protein ECERIFERUM 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01018420001 CER1 Protein ECERIFERUM 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01023740001 CER3, WAX2, YRE, FLP1 Cell wall.cutin and suberin.cuticular lipid... 0.03 OrthoFinder output from all 47 species
Gb_13363 CER3, WAX2, YRE, FLP1 no description available(sp|q69pa8|glo11_orysj : 168.0) 0.02 OrthoFinder output from all 47 species
Gb_13823 CER1 aldehyde decarbonylase component CER1 of CER1-CER3... 0.03 OrthoFinder output from all 47 species
Gb_23488 CER3, WAX2, YRE, FLP1 aldehyde decarbonylase component CER1 of CER1-CER3... 0.03 OrthoFinder output from all 47 species
Gb_23964 CER3, WAX2, YRE, FLP1 aldehyde-generating component CER3 of CER1-CER3... 0.03 OrthoFinder output from all 47 species
Len_g11840 CER1 aldehyde decarbonylase component *(CER1) of CER1-CER3... 0.03 OrthoFinder output from all 47 species
MA_10162310g0010 No alias no description available(sp|b8afi3|glo14_orysi : 241.0)... 0.02 OrthoFinder output from all 47 species
MA_10435047g0010 CER3, WAX2, YRE, FLP1 aldehyde-generating component CER3 of CER1-CER3... 0.02 OrthoFinder output from all 47 species
MA_10435069g0020 CER1 aldehyde decarbonylase component CER1 of CER1-CER3... 0.05 OrthoFinder output from all 47 species
MA_107531g0010 CER3, WAX2, YRE, FLP1 aldehyde-generating component CER3 of CER1-CER3... 0.02 OrthoFinder output from all 47 species
MA_19405g0010 CER3, WAX2, YRE, FLP1 no description available(sp|q69pa8|glo11_orysj : 169.0) 0.02 OrthoFinder output from all 47 species
MA_259293g0010 CER1 no description available(sp|b8afi3|glo14_orysi : 180.0) 0.02 OrthoFinder output from all 47 species
MA_39280g0020 No alias Protein CER1-like 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_63024g0010 CER3, WAX2, YRE, FLP1 Protein ECERIFERUM 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_781241g0010 CER3, WAX2, YRE, FLP1 no description available(sp|q67wq7|glo13_orysj : 120.0) 0.02 OrthoFinder output from all 47 species
Mp1g14030.1 CER3, WAX2, YRE, FLP1 aldehyde-generating component CER3 of CER1-CER3... 0.03 OrthoFinder output from all 47 species
Msp_g10911 CER1 aldehyde decarbonylase component *(CER1) of CER1-CER3... 0.03 OrthoFinder output from all 47 species
Ppi_g12498 CER3, WAX2, YRE, FLP1 aldehyde-generating component *(CER3) of CER1-CER3... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006413 CER3, WAX2, YRE, FLP1 aldehyde-generating component *(CER3) of CER1-CER3... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011579 No alias not classified & original description: CDS=105-374 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011580 No alias not classified & original description: CDS=1-546 0.04 OrthoFinder output from all 47 species
Sam_g50719 No alias aldehyde decarbonylase component *(CER1) of CER1-CER3... 0.03 OrthoFinder output from all 47 species
Smo137211 CER3, WAX2, YRE, FLP1 Protein ECERIFERUM 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo230422 CER1 Cell wall.cutin and suberin.cuticular lipid... 0.02 OrthoFinder output from all 47 species
Smo99824 No alias Protein ECERIFERUM 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc03g065250.4.1 CER1, Solyc03g065250 aldehyde decarbonylase component CER1 of CER1-CER3... 0.04 OrthoFinder output from all 47 species
Spa_g07282 CER3, WAX2, YRE, FLP1 aldehyde-generating component *(CER3) of CER1-CER3... 0.02 OrthoFinder output from all 47 species
Spa_g54942 CER3, WAX2, YRE, FLP1 aldehyde-generating component *(CER3) of CER1-CER3... 0.02 OrthoFinder output from all 47 species
Tin_g08642 CER3, WAX2, YRE, FLP1 aldehyde-generaTing component *(CER3) of CER1-CER3... 0.04 OrthoFinder output from all 47 species
Tin_g45355 CER3, WAX2, YRE, FLP1 aldehyde-generaTing component *(CER3) of CER1-CER3... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA Interproscan
BP GO:0008610 lipid biosynthetic process IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006694 Fatty_acid_hydroxylase 142 234
No external refs found!