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  5. Sam_g28984

Sam_g28984


Description : WRKY-type transcription factor & original description: none


Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g28984

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00015p00228580 WRKY53,... RNA biosynthesis.transcriptional activation.WRKY... 0.02 OrthoFinder output from all 47 species
AMTR_s00023p00102530 WRKY33,... RNA biosynthesis.transcriptional activation.WRKY... 0.02 OrthoFinder output from all 47 species
AMTR_s00058p00090300 WRKY4,... RNA biosynthesis.transcriptional activation.WRKY... 0.02 OrthoFinder output from all 47 species
AMTR_s00110p00091490 ATWRKY57,... RNA biosynthesis.transcriptional activation.WRKY... 0.02 OrthoFinder output from all 47 species
AMTR_s00156p00038330 WRKY9, ATWRKY9,... RNA biosynthesis.transcriptional activation.WRKY... 0.03 OrthoFinder output from all 47 species
AT1G13960 WRKY4 WRKY DNA-binding protein 4 0.02 OrthoFinder output from all 47 species
AT1G66600 ABO3, WRKY63, ATWRKY63 ABA overly sensitive mutant 3 0.02 OrthoFinder output from all 47 species
AT5G15130 WRKY72, ATWRKY72 WRKY DNA-binding protein 72 0.03 OrthoFinder output from all 47 species
AT5G41570 ATWRKY24, WRKY24 WRKY DNA-binding protein 24 0.03 OrthoFinder output from all 47 species
Adi_g061046 WRKY9, ATWRKY9 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g01407 WRKY23, ATWRKY23 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g13852 WRKY43, ATWRKY43 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g33360 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g11196 No alias WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g22671 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g15552 WRKY8, ATWRKY8 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g15724 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11911 WRKY42, AtWRKY42 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16136 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene00114.t1 WRKY53,... WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30007.t1 ATWRKY45,... WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31451.t2 ATWRKY24,... WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene52709.t1 Aspi01Gene52709 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene52729.t1 WRKY28,... WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52849.t1 Aspi01Gene52849 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65373.t1 WRKY26, Aspi01Gene65373 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0065.g035812 WRKY9, ATWRKY9 WRKY-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0245.g059987 AtWRKY20, WRKY20 WRKY-type transcription factor & original description: CDS=1-2319 0.02 OrthoFinder output from all 47 species
Azfi_s0557.g076884 ATWRKY45, WRKY45 WRKY-type transcription factor & original description: CDS=1-963 0.02 OrthoFinder output from all 47 species
Ceric.09G081700.1 ATWRKY50,... WRKY-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.20G087200.1 WRKY26, Ceric.20G087200 WRKY-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.28G003100.1 WRKY31,... WRKY-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g42615 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g51139 WRKY9, ATWRKY9 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21871 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008046001 WRKY72, ATWRKY72 RNA biosynthesis.transcriptional activation.WRKY... 0.03 OrthoFinder output from all 47 species
GSVIVT01008553001 WRKY75, ATWRKY75 RNA biosynthesis.transcriptional activation.WRKY... 0.02 OrthoFinder output from all 47 species
GSVIVT01028718001 WRKY53, ATWRKY53 RNA biosynthesis.transcriptional activation.WRKY... 0.02 OrthoFinder output from all 47 species
GSVIVT01033194001 ATWRKY51, WRKY51 RNA biosynthesis.transcriptional activation.WRKY... 0.03 OrthoFinder output from all 47 species
LOC_Os01g09080.1 WRKY72,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
LOC_Os01g14440.1 WRKY6, ATWRKY6,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
LOC_Os01g18584.1 AtWRKY47,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
LOC_Os03g45450.1 ATWRKY71,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
LOC_Os07g48260.1 WRKY54,... transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
LOC_Os12g02420.1 WRKY55,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Lfl_g29076 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g36039 ATWRKY57, WRKY57 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_103616g0010 WRKY6, ATWRKY6 transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
MA_125146g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_892467g0010 WRKY72, ATWRKY72 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Msp_g11048 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g26422 WRKY4 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g16493 WRKY42, AtWRKY42 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g12131 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16886 WRKY42, AtWRKY42 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25880 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29204 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29699 WRKY53, ATWRKY53 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g34154 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c22_12880V3.1 ATWRKY50,... WRKY DNA-binding protein 48 0.01 OrthoFinder output from all 47 species
Ppi_g42318 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g42620 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009066 WRKY33, ATWRKY33 WRKY-type transcription factor & original description: CDS=9-1697 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0108.g020447 WRKY72, ATWRKY72 WRKY-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0139.g022621 ATWRKY71, WRKY71 WRKY-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Sam_g09440 No alias WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18765 No alias WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g22478 No alias WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38149 No alias WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g45089 No alias WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g095630.3.1 AtWRKY41,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Solyc02g080890.3.1 WRKY6, ATWRKY6,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Solyc04g056365.1.1 Solyc04g056365 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc06g048870.3.1 WRKY55,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Solyc06g070990.3.1 WRKY61,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Solyc08g081630.2.1 WRKY56,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Spa_g22422 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11625 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g14530 WRKY4 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005732_P002 ATWRKY57,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e018502_P001 WRKY49,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e019448_P001 WRKY38,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Zm00001e024352_P003 WRKY2, ATWRKY2,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e025937_P001 WRKY72,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e027301_P001 WRKY54,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e027804_P001 WRKY9, ATWRKY9,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e031901_P001 WRKY33,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e036514_P001 WRKY72,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Zm00001e038239_P001 WRKY46,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e040369_P001 WRKY6, ATWRKY6,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003657 WRKY_dom 322 379
No external refs found!