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  5. Sam_g28954

Sam_g28954


Description : cohesin cofactor *(WAPL) & original description: none


Gene families : OG0002929 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002929_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g28954

Target Alias Description ECC score Gene Family Method Actions
Adi_g079754 No alias cohesin cofactor *(WAPL) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g124261 No alias cohesin cofactor *(WAPL) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g124529 No alias cohesin cofactor *(WAPL) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g03756 No alias cohesin cofactor *(WAPL) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os10g35380.1 LOC_Os10g35380 cohesin cofactor (WAPL) 0.02 OrthoFinder output from all 47 species
Lfl_g04943 No alias cohesin cofactor *(WAPL) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11391 No alias cohesin cofactor *(WAPL) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0050.g013867 No alias cohesin cofactor *(WAPL) & original description: CDS=77-2743 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0837.g027771 No alias cohesin cofactor *(WAPL) & original description: CDS=94-885 0.03 OrthoFinder output from all 47 species
Smo443608 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.03 OrthoFinder output from all 47 species
Zm00001e012602_P001 Zm00001e012602 cohesin cofactor (WAPL) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003873 6-phosphofructo-2-kinase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006000 fructose metabolic process IEP HCCA
MF GO:0008443 phosphofructokinase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
CC GO:0070531 BRCA1-A complex IEP HCCA
CC GO:0070552 BRISC complex IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR022771 WAPL_C 3 106
No external refs found!