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  5. Sam_g28924

Sam_g28924


Description : regulatory subunit beta of SnRK1 kinase complex & original description: none


Gene families : OG0000948 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000948_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g28924

Target Alias Description ECC score Gene Family Method Actions
Adi_g116993 AKINBETA1 regulatory subunit beta of SnRK1 kinase complex &... 0.02 OrthoFinder output from all 47 species
Als_g02391 AKINBETA1 regulatory subunit beta of SnRK1 kinase complex &... 0.03 OrthoFinder output from all 47 species
Ehy_g00892 AKINBETA1 regulatory subunit beta of SnRK1 kinase complex &... 0.02 OrthoFinder output from all 47 species
Lfl_g05452 AKINBETA1 regulatory subunit beta of SnRK1 kinase complex &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0147.g023135 AKINBETA1 regulatory subunit beta of SnRK1 kinase complex &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR032640 AMPK1_CBM 85 166
IPR006828 ASC_dom 198 268
No external refs found!