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  5. Sam_g28880

Sam_g28880


Description : Trihelix-type transcription factor & original description: none


Gene families : OG0001565 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001565_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g28880

Target Alias Description ECC score Gene Family Method Actions
Adi_g023152 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24456.t1 Aspi01Gene24456 Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene54951.t1 Aspi01Gene54951 Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g00825 No alias Trihelix-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g01344 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g37659 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05878 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06866 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0047429 nucleoside triphosphate diphosphatase activity IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 32 120
No external refs found!