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  5. Sam_g28756

Sam_g28756


Description : E3 ubiquitin ligase *(RFI2) & original description: none


Gene families : OG0000823 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000823_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g28756

Target Alias Description ECC score Gene Family Method Actions
Cba_g53757 No alias E3 ubiquitin ligase *(RFI2) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G016400.1 RFI2, Ceric.06G016400 E3 ubiquitin ligase *(RFI2) & original description:... 0.02 OrthoFinder output from all 47 species
GSVIVT01028007001 RFI2 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
LOC_Os01g24880.1 LOC_Os01g24880 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Len_g19619 No alias E3 ubiquitin ligase *(RFI2) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g00923 RFI2 E3 ubiquitin ligase *(RFI2) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12433 No alias E3 ubiquitin ligase *(RFI2) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0050.g013828 RFI2 E3 ubiquitin ligase *(RFI2) & original description: CDS=264-1613 0.03 OrthoFinder output from all 47 species
Sam_g28755 No alias E3 ubiquitin ligase *(RFI2) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01712 No alias E3 ubiquiTin ligase *(RFI2) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04661 No alias E3 ubiquiTin ligase *(RFI2) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 15 60
No external refs found!