Sam_g28671

Description : metal cation transporter *(MRS/MGT) & original description: none

Gene families : OG0000346 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000346_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g28671
Cluster	HCCA: Cluster_181

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00039340	MRS2-1, MGT2,...	Solute transport.channels.CorA family.MRS/MGT metal...	0.02	OrthoFinder output from all 47 species
Ala_g14440	MGT4, MRS2-3	metal cation transporter *(MRS/MGT) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g12033	ATMGT9, MGT9, MRS2-2	metal cation transporter *(MRS/MGT) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g32318	ATMGT9, MGT9, MRS2-2	metal cation transporter *(MRS/MGT) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g10680	MRS2-1, MGT2	metal cation transporter *(MRS/MGT) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01015987001	MRS2-1, MGT2	Solute transport.channels.CorA family.MRS/MGT metal...	0.01	OrthoFinder output from all 47 species
GSVIVT01018104001	ATMGT9, MGT9, MRS2-2	Solute transport.channels.CorA family.MRS/MGT metal...	0.01	OrthoFinder output from all 47 species
Msp_g12658	MRS2-1, MGT2	metal cation transporter *(MRS/MGT) & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0083.g018151	MGT4, MRS2-3	metal cation transporter *(MRS/MGT) & original...	0.03	OrthoFinder output from all 47 species
Smo165091	MRS2-1, MGT2	Solute transport.channels.CorA family.MRS/MGT metal...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008324	monoatomic cation transmembrane transporter activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
BP	GO:0030001	metal ion transport	IEA	Interproscan
MF	GO:0046873	metal ion transmembrane transporter activity	IEA	Interproscan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002523	MgTranspt_CorA/ZnTranspt_ZntB	381	485

External Links

No external refs found!