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Sam_g28641


Description : EC_4.1 carbon-carbon lyase & original description: none


Gene families : OG0001402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001402_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g28641

Target Alias Description ECC score Gene Family Method Actions
Adi_g073603 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06499 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Gb_08493 No alias Enzyme classification.EC_4 lyases.EC_4.1 carbon-carbon... 0.02 OrthoFinder output from all 47 species
Gb_33734 PDC2 Pyruvate decarboxylase 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011301 No alias EC_4.1 carbon-carbon lyase & original description: CDS=224-1318 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0192.g025348 PDC2 EC_4.1 carbon-carbon lyase & original description: CDS=91-1182 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0030976 thiamine pyrophosphate binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006305 DNA alkylation IEP HCCA
BP GO:0006306 DNA methylation IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044728 DNA methylation or demethylation IEP HCCA
InterPro domains Description Start Stop
IPR012000 Thiamin_PyroP_enz_cen_dom 223 339
IPR012001 Thiamin_PyroP_enz_TPP-bd_dom 30 196
IPR011766 TPP_enzyme_TPP-bd 433 557
No external refs found!