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  5. Sam_g28624

Sam_g28624


Description : not classified & original description: none


Gene families : OG0000230 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000230_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g28624

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00029570 ATCHX20, CHX20,... Solute transport.carrier-mediated transport.CPA... 0.03 OrthoFinder output from all 47 species
AMTR_s00021p00101650 ATCHX19, CHX19,... Solute transport.carrier-mediated transport.CPA... 0.02 OrthoFinder output from all 47 species
AT1G64170 CHX16, ATCHX16 cation/H+ exchanger 16 0.03 OrthoFinder output from all 47 species
Adi_g055098 ATCHX18, CHX18 proton:monovalent cation antiporter *(CHX) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene13240.t1 ATCHX20, CHX20,... proton:monovalent cation antiporter *(CHX) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0015.g014072 ATCHX18, CHX18 proton:monovalent cation antiporter *(CHX) & original... 0.03 OrthoFinder output from all 47 species
Ceric.20G020100.1 ATCHX19, CHX19,... proton:monovalent cation antiporter *(CHX) & original... 0.02 OrthoFinder output from all 47 species
Ceric.23G062800.1 ATCHX19, CHX19,... proton:monovalent cation antiporter *(CHX) & original... 0.02 OrthoFinder output from all 47 species
Dac_g09768 ATCHX18, CHX18 proton:monovalent cation antiporter *(CHX) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01026473001 CHX15, ATCHX15 Solute transport.carrier-mediated transport.CPA... 0.02 OrthoFinder output from all 47 species
MA_5796458g0010 ATCHX20, CHX20 Cation/H(+) antiporter 20 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007322 ATCHX18, CHX18 proton:monovalent cation antiporter *(CHX) & original... 0.04 OrthoFinder output from all 47 species
Solyc05g052320.4.1 CHX3, ATCHX3,... proton:monovalent cation antiporter (CHX) 0.02 OrthoFinder output from all 47 species
Solyc06g009240.4.1 CHX15, ATCHX15,... proton:monovalent cation antiporter (CHX) 0.02 OrthoFinder output from all 47 species
Spa_g28528 ATCHX18, CHX18 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g57053 ATCHX20, CHX20 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003243_P001 ATCHX19, CHX19,... proton:monovalent cation antiporter (CHX) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006812 monoatomic cation transport IEA Interproscan
MF GO:0015299 obsolete solute:proton antiporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR006153 Cation/H_exchanger 54 215
No external refs found!