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Description : auxin efflux transporter *(PIN) & original description: none
Gene families : OG0000569 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000569_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sam_g28472 | |
| Cluster | HCCA: Cluster_73 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cba_g38942 | PIN3, ATPIN3 | auxin efflux transporter *(PIN) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g02807 | ATPIN1, PIN1 | auxin efflux transporter *(PIN) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01011755001 | No alias | Solute transport.carrier-mediated transport.BART... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01011756001 | PIN3, ATPIN3 | Solute transport.carrier-mediated transport.BART... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01029266001 | EIR1, WAV6,... | Solute transport.carrier-mediated transport.BART... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g12533 | ATPIN1, PIN1 | auxin efflux transporter *(PIN) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g10484 | ATPIN4, PIN4 | auxin efflux transporter *(PIN) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g25443 | ATPIN1, PIN1 | auxin efflux transporter *(PIN) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g26841 | No alias | auxin efflux transporter *(PIN) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g087660.4.1 | PIN8, ATPIN8,... | auxin transporter (PIN). auxin efflux transporter (PIN) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0016020 | membrane | IEA | Interproscan |
| BP | GO:0055085 | transmembrane transport | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004776 | Mem_trans | 10 | 413 |
| No external refs found! |