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  5. Sam_g28460

Sam_g28460


Description : not classified & original description: none


Gene families : OG0004116 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004116_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g28460

Target Alias Description ECC score Gene Family Method Actions
AT5G17900 No alias microfibrillar-associated protein-related 0.02 OrthoFinder output from all 47 species
Aob_g03279 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g26770 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cre05.g232950 No alias No description available 0.01 OrthoFinder output from all 47 species
LOC_Os02g17870.1 LOC_Os02g17870 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g22850.2 LOC_Os06g22850 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g23320.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Sam_g10581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g100500.3.1 Solyc01g100500 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e024108_P001 Zm00001e024108 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR009730 MFAP1_C 165 385
No external refs found!