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  5. Sam_g28457

Sam_g28457


Description : not classified & original description: none


Gene families : OG0001294 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001294_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g28457
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AT2G33990 iqd9 IQ-domain 9 0.05 OrthoFinder output from all 47 species
AT3G15050 IQD10 IQ-domain 10 0.03 OrthoFinder output from all 47 species
AT3G22190 IQD5 IQ-domain 5 0.04 OrthoFinder output from all 47 species
Als_g51530 IQD6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18384 IQD6 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene24175.t1 IQD5, Aspi01Gene24175 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.08G062300.1 IQD5, Ceric.08G062300 not classified & original description: pacid=50637998... 0.05 OrthoFinder output from all 47 species
Dcu_g31746 IQD6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014238001 IQD10 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os01g09790.1 IQD6, LOC_Os01g09790 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g04210.1 IQD20, LOC_Os03g04210 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os06g06160.2 iqd9, LOC_Os06g06160 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g10261 IQD6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp5g20460.1 IQD6 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Nbi_g42366 IQD6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02071 IQD5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14460 IQD6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007120 IQD5 not classified & original description: CDS=1-1005 0.03 OrthoFinder output from all 47 species
Solyc02g077260.3.1 IQD10, Solyc02g077260 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc10g008790.3.1 iqd9, Solyc10g008790 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc12g014130.2.1 IQD10, Solyc12g014130 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Spa_g07878 IQD5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g24143 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06466 IQD5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e026335_P001 IQD10, Zm00001e026335 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 80 98
No external refs found!