Sam_g28438


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g28438

Target Alias Description ECC score Gene Family Method Actions
Aev_g06254 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g17143 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g17002 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g21675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07097 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67727 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Azfi_s0013.g013171 SLO1 not classified & original description: CDS=1-1446 0.04 OrthoFinder output from all 47 species
Azfi_s0028.g023799 No alias not classified & original description: CDS=1-1911 0.05 OrthoFinder output from all 47 species
Azfi_s0068.g036252 No alias not classified & original description: CDS=1-1656 0.04 OrthoFinder output from all 47 species
Ceric.03G031200.1 DOT4, Ceric.03G031200 not classified & original description: pacid=50571902... 0.04 OrthoFinder output from all 47 species
Ceric.12G030100.1 Ceric.12G030100 not classified & original description: pacid=50600629... 0.03 OrthoFinder output from all 47 species
Ceric.18G049100.1 Ceric.18G049100 not classified & original description: pacid=50621467... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001130.28 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g36041 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37938 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g45418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g45717 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16797 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g36056 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g39614 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g02370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g03866 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g09780 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g17706 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g19009 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g04421 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g11675 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g17576 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g39535 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g39566 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19566 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g54471 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63793 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g15003 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15731 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29583 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31582 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g35865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g52857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16549 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g22472 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g26236 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g33616 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g24631 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26612 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35656 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 172 220
IPR002885 Pentatricopeptide_repeat 575 622
IPR002885 Pentatricopeptide_repeat 71 119
IPR002885 Pentatricopeptide_repeat 372 420
IPR002885 Pentatricopeptide_repeat 549 568
IPR002885 Pentatricopeptide_repeat 248 274
IPR002885 Pentatricopeptide_repeat 448 474
IPR002885 Pentatricopeptide_repeat 147 168
IPR002885 Pentatricopeptide_repeat 650 670
No external refs found!