Sam_g28407

Description : not classified & original description: none

Gene families : OG0001359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001359_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g28407
Cluster	HCCA: Cluster_27

Target	Alias	Description	ECC score	Gene Family Method
Sacu_v1.1_s0006.g003253	No alias	not classified & original description: CDS=1-909	0.03	OrthoFinder output from all 47 species
Sam_g02686	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g15894	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g21898	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g25813	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g30078	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g33724	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g34315	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Sam_g36220	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g46553	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g46839	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015074	DNA integration	IEA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008199	ferric iron binding	IEP	HCCA
MF	GO:0016872	intramolecular lyase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001584	Integrase_cat-core	7	94

External Links

No external refs found!