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  5. Sam_g28255

Sam_g28255


Description : component *(Tic100) of inner envelope TIC-20 complex & original description: none


Gene families : OG0006970 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006970_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g28255

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00213060 emb1211,... Protein translocation.chloroplast.inner envelope TIC... 0.02 OrthoFinder output from all 47 species
AT5G22640 emb1211 MORN (Membrane Occupation and Recognition Nexus)... 0.03 OrthoFinder output from all 47 species
Aop_g11690 emb1211 component *(Tic100) of inner envelope TIC-20 complex &... 0.03 OrthoFinder output from all 47 species
Azfi_s0155.g053661 emb1211 component *(Tic100) of inner envelope TIC-20 complex &... 0.08 OrthoFinder output from all 47 species
GSVIVT01031401001 emb1211 Protein translocation.chloroplast.inner envelope TIC... 0.02 OrthoFinder output from all 47 species
Len_g50525 emb1211 component *(Tic100) of inner envelope TIC-20 complex &... 0.04 OrthoFinder output from all 47 species
Mp2g06920.1 emb1211 component Tic100 of inner envelope TIC-20 complex 0.03 OrthoFinder output from all 47 species
Msp_g13277 emb1211 component *(Tic100) of inner envelope TIC-20 complex &... 0.03 OrthoFinder output from all 47 species
Nbi_g07932 emb1211 component *(Tic100) of inner envelope TIC-20 complex &... 0.04 OrthoFinder output from all 47 species
Nbi_g17291 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41461 emb1211 component *(Tic100) of inner envelope TIC-20 complex &... 0.03 OrthoFinder output from all 47 species
Pir_g66555 emb1211 component *(Tic100) of inner envelope TIC-20 complex &... 0.03 OrthoFinder output from all 47 species
Solyc11g066870.3.1 emb1211, Solyc11g066870 component Tic100 of inner envelope TIC-20 complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0010024 phytochromobilin biosynthetic process IEP HCCA
BP GO:0010257 NADH dehydrogenase complex assembly IEP HCCA
BP GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly IEP HCCA
BP GO:0010275 NAD(P)H dehydrogenase complex assembly IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0043650 dicarboxylic acid biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0050897 cobalt ion binding IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051202 phytochromobilin metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0070006 metalloaminopeptidase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003409 MORN 209 224
IPR003409 MORN 185 202
IPR003409 MORN 302 317
No external refs found!