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  5. Sam_g28191

Sam_g28191


Description : component *(GID7) of GID ubiquitination complex & original description: none


Gene families : OG0002376 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002376_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g28191

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00186000 evm_27.TU.AmTr_v1... WD repeat-containing protein WDS homolog OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Ehy_g18732 No alias component *(GID7) of GID ubiquitination complex &... 0.02 OrthoFinder output from all 47 species
Lfl_g01841 No alias component *(GID7) of GID ubiquitination complex &... 0.02 OrthoFinder output from all 47 species
Spa_g04565 No alias component *(GID7) of GID ubiquitination complex &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
CC GO:0005795 Golgi stack IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
MF GO:0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
CC GO:0031984 organelle subcompartment IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 267 303
IPR001680 WD40_repeat 478 517
IPR001680 WD40_repeat 524 560
IPR013979 TIF_beta_prop-like 320 399
No external refs found!