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  5. Sam_g28133

Sam_g28133


Description : not classified & original description: none


Gene families : OG0004629 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004629_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g28133

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00177p00068130 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT3G01060 No alias unknown protein; Has 640 Blast hits to 638 proteins in... 0.04 OrthoFinder output from all 47 species
Adi_g015219 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g00954 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10524 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g00740 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60491.t1 Aspi01Gene60491 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010114 EMB2744 not classified & original description: CDS=310-1704 0.04 OrthoFinder output from all 47 species
Ceric.03G011300.1 Ceric.03G011300 not classified & original description: pacid=50572931... 0.02 OrthoFinder output from all 47 species
Cre13.g562750 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g18564 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02919 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04581 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os05g43650.1 LOC_Os05g43650 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g15104 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11299 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_10436278g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ore_g31172 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g15981 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30984 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g013240.4.1 Solyc03g013240 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g15378 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g02619 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e032116_P003 Zm00001e032116 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0046422 violaxanthin de-epoxidase activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR025638 DUF4336 99 392
No external refs found!