1. Home
  2. Species
  3. Salvinia molesta
  4. Sequence
  5. Sam_g28016

Sam_g28016


Description : cation:calcium cation exchanger *(CCX) & original description: none


Gene families : OG0000634 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000634_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g28016
Cluster HCCA: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
AT5G17860 CAX7 calcium exchanger 7 0.03 OrthoFinder output from all 47 species
Azfi_s0018.g014734 ATCCX4, CCX4 cation:calcium cation exchanger *(CCX) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g13084 ATCCX4, CCX4 cation:calcium cation exchanger *(CCX) & original... 0.03 OrthoFinder output from all 47 species
Mp8g14960.1 ATCCX4, CCX4 cation:calcium cation exchanger (CCX) 0.01 OrthoFinder output from all 47 species
Msp_g06351 ATCCX4, CCX4 cation:calcium cation exchanger *(CCX) & original... 0.03 OrthoFinder output from all 47 species
Spa_g07940 CAX9, ATCCX3, CCX3 cation:calcium cation exchanger *(CCX) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR004837 NaCa_Exmemb 451 600
IPR004837 NaCa_Exmemb 130 281
No external refs found!