Description : XRN4-exoribonuclease cofactor *(LARP1) & original description: none
Gene families : OG0000608 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000608_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sam_g27980 | |
Cluster | HCCA: Cluster_25 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g020042 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Adi_g020044 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g055478 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g111867 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aop_g02092 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dac_g07463 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dac_g13200 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g05816 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g06177 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g37534 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g44181 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g07242 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g10149 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0132.g022179 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e025537_P001 | Zm00001e025537 | XRN4-exoribonuclease cofactor (LARP1) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
BP | GO:0005984 | disaccharide metabolic process | IEP | HCCA |
BP | GO:0005991 | trehalose metabolic process | IEP | HCCA |
BP | GO:0005992 | trehalose biosynthetic process | IEP | HCCA |
BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009143 | nucleoside triphosphate catabolic process | IEP | HCCA |
BP | GO:0009311 | oligosaccharide metabolic process | IEP | HCCA |
BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | HCCA |
BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
MF | GO:0019842 | vitamin binding | IEP | HCCA |
MF | GO:0030976 | thiamine pyrophosphate binding | IEP | HCCA |
BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
BP | GO:0046351 | disaccharide biosynthetic process | IEP | HCCA |
BP | GO:0046434 | organophosphate catabolic process | IEP | HCCA |
BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
MF | GO:0047429 | nucleoside triphosphate diphosphatase activity | IEP | HCCA |
MF | GO:0050997 | quaternary ammonium group binding | IEP | HCCA |
BP | GO:1901292 | nucleoside phosphate catabolic process | IEP | HCCA |
BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
MF | GO:1901681 | sulfur compound binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006630 | La_HTH | 379 | 435 |
No external refs found! |