Sam_g27901

Description : E3 ubiquitin ligase *(SAUL) & original description: none

Gene families : OG0000782 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000782_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g27901

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00268880	evm_27.TU.AmTr_v1...	Protein degradation.peptide tagging.Ubiquitin...	0.02	OrthoFinder output from all 47 species
Aop_g00798	No alias	E3 ubiquitin ligase *(SAUL) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g04630	No alias	E3 ubiquitin ligase *(SAUL) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.09G008100.1	PUB44, SAUL1,...	E3 ubiquitin ligase *(SAUL) & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g09678	No alias	E3 ubiquitin ligase *(SAUL) & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g04107	PUB44, SAUL1, ATPUB44	E3 ubiquitin ligase *(SAUL) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g12042	PUB44, SAUL1, ATPUB44	E3 ubiquitin ligase *(SAUL) & original description: none	0.04	OrthoFinder output from all 47 species
MA_63057g0020	No alias	E3 ubiquitin ligase (PUB)	0.02	OrthoFinder output from all 47 species
Pir_g10435	No alias	E3 ubiquitin ligase *(SAUL) & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g32045	PUB44, SAUL1, ATPUB44	E3 ubiquitin ligase *(SAUL) & original description: none	0.02	OrthoFinder output from all 47 species
Smo77081	PUB44, SAUL1, ATPUB44	Protein degradation.peptide tagging.Ubiquitin...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	HCCA
CC	GO:0005694	chromosome	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR045766	MCAfunc	31	151
IPR000225	Armadillo	533	568
IPR000225	Armadillo	570	612
IPR003613	Ubox_domain	265	331

External Links

No external refs found!