Sam_g27888


Description : not classified & original description: none


Gene families : OG0000572 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000572_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g27888
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AT1G17430 No alias alpha/beta-Hydrolases superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G18360 No alias alpha/beta-Hydrolases superfamily protein 0.03 OrthoFinder output from all 47 species
Aop_g19899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47294.t1 Aspi01Gene47294 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009036001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_04818 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g44960.1 LOC_Os01g44960 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g08100.1 LOC_Os03g08100 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_181g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp1g06240.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp5g17800.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g25211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28681 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g37708 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc10g047340.2.1 Solyc10g047340 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g05985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001875_P001 Zm00001e001875 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e025866_P002 Zm00001e025866 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0047746 chlorophyllase activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000073 AB_hydrolase_1 14 96
No external refs found!