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  5. Sam_g27837

Sam_g27837


Description : protease *(RBL) & original description: none


Gene families : OG0000668 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000668_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g27837

Target Alias Description ECC score Gene Family Method Actions
Als_g39472 RBL1, ATRBL1 protease *(RBL) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05273.t1 RBL1, ATRBL1,... protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07016.t1 RBL1, ATRBL1,... protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16164 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25784 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10680 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13820 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14488 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004629 phospholipase C activity IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR022764 Peptidase_S54_rhomboid_dom 167 308
No external refs found!