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  5. Sam_g27704

Sam_g27704


Description : not classified & original description: none


Gene families : OG0000811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000811_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g27704

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00131p00032340 evm_27.TU.AmTr_v1... CASP-like protein 2A1 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
Aev_g03545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06538 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g20279 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0045.g030020 No alias not classified & original description: CDS=85-666 0.02 OrthoFinder output from all 47 species
Cba_g08984 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G018700.1 Ceric.02G018700 not classified & original description: pacid=50584078... 0.02 OrthoFinder output from all 47 species
Dcu_g46991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010256001 No alias CASP-like protein 2A1 OS=Vitis vinifera 0.02 OrthoFinder output from all 47 species
Len_g04097 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g28436 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_286708g0010 No alias CASP-like protein 2A2 OS=Picea sitchensis... 0.02 OrthoFinder output from all 47 species
Mp5g15430.1 No alias CASP-like protein 2U1 OS=Marchantia polymorpha... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014965 No alias not classified & original description: CDS=570-1202 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0102.g019924 No alias not classified & original description: CDS=83-670 0.03 OrthoFinder output from all 47 species
Solyc05g054190.4.1 Solyc05g054190 CASP-like protein 2B1 OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
Spa_g05660 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006465 signal peptide processing IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
InterPro domains Description Start Stop
IPR006702 CASP_dom 44 195
No external refs found!