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  5. Sam_g27677

Sam_g27677


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g27677
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
Adi_g002777 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g003802 SLO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g008203 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g016117 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g018203 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g018586 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g033460 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036254 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036763 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g066083 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g067225 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g068858 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g096243 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g097033 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g111214 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07273 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g20571 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g17623 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07425 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08105 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14128 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14639 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19046 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g23634 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30855 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30894 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30905 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g39237 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05266 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g09079 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22148 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27891 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g36072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g52616 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene07941.t1 LPA66, Aspi01Gene07941 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene09926.t1 CRR22, Aspi01Gene09926 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene12870.t1 Aspi01Gene12870 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene13980.t1 Aspi01Gene13980 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28051.t2 OSB3, Aspi01Gene28051 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene34884.t1 Aspi01Gene34884 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene35048.t1 Aspi01Gene35048 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene37985.t1 DOT4, Aspi01Gene37985 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40915.t1 CRR22, Aspi01Gene40915 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene41281.t1 OTP84, Aspi01Gene41281 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52005.t1 Aspi01Gene52005 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene54625.t1 Aspi01Gene54625 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57232.t1 Aspi01Gene57232 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61944.t1 OSB3, Aspi01Gene61944 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.03 OrthoFinder output from all 47 species
Cba_g37586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g56780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G042100.1 EMB2758, Ceric.11G042100 not classified & original description: pacid=50596851... 0.02 OrthoFinder output from all 47 species
Ceric.1Z254100.1 Ceric.1Z254100 not classified & original description: pacid=50632850... 0.02 OrthoFinder output from all 47 species
Dac_g25167 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g34941 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g37683 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08907 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g19456 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21471 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g24332 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g48807 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04314 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g05344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08522 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21846 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22836 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g24220 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03091 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19509 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26930 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01033906001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os11g17530.2 LOC_Os11g17530 Pentatricopeptide repeat-containing protein At2g37320... 0.02 OrthoFinder output from all 47 species
Len_g03879 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g05135 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g05415 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06715 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32911 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g33282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10338179g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
Msp_g10943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13610 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g28793 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g41408 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g19491 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27639 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g38645 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g18691 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19065 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g21989 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30175 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33886 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40050 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11796 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13573 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g20473 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g56906 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57728 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63827 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g64612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23074 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23560 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04004 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04988 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53359 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001740 No alias not classified & original description: CDS=1-624 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010179 No alias not classified & original description: CDS=88-2685 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015021 No alias not classified & original description: CDS=1-2220 0.03 OrthoFinder output from all 47 species
Sam_g37213 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo16626 No alias Pentatricopeptide repeat-containing protein At4g16835,... 0.01 OrthoFinder output from all 47 species
Solyc04g079410.3.1 Solyc04g079410 ssDNA-binding protein (OSB) 0.03 OrthoFinder output from all 47 species
Spa_g10134 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48497 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26445 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g35061 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g43907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019902 phosphatase binding IEP HCCA
MF GO:0019903 protein phosphatase binding IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 384 407
IPR002885 Pentatricopeptide_repeat 181 204
IPR002885 Pentatricopeptide_repeat 105 151
IPR002885 Pentatricopeptide_repeat 206 253
IPR002885 Pentatricopeptide_repeat 309 355
IPR002885 Pentatricopeptide_repeat 410 457
No external refs found!