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  5. Sam_g27650

Sam_g27650


Description : not classified & original description: none


Gene families : OG0003459 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003459_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g27650
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AT1G04140 No alias Transducin family protein / WD-40 repeat family protein 0.03 OrthoFinder output from all 47 species
Aob_g05354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30420 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001859001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01028455001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os02g18820.2 LOC_Os02g18820 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g03437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp7g08660.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g09170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25615 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017365 No alias not classified & original description: CDS=380-3100 0.03 OrthoFinder output from all 47 species
Smo413471 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc05g053130.3.1 Solyc05g053130 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g091020.3.1 Solyc09g091020 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g12634 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g12788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e040649_P001 Zm00001e040649 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 105 126
IPR001680 WD40_repeat 134 171
No external refs found!