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  5. Sam_g27575

Sam_g27575


Description : EC_2.1 transferase transferring one-carbon group & original description: none


Gene families : OG0000518 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000518_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g27575

Target Alias Description ECC score Gene Family Method Actions
AT4G32520 AtSHMT3, SHM3 serine hydroxymethyltransferase 3 0.03 OrthoFinder output from all 47 species
Cre09.g411900 AtSHMT3, SHM3 Photosynthesis.photorespiration.serine hydroxymethyltransferase 0.02 OrthoFinder output from all 47 species
Dde_g20927 STM, SHM1, SHMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Sam_g48680 No alias EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Zm00001e005607_P001 STM, SHM1,... serine hydroxymethyltransferase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
InterPro domains Description Start Stop
IPR039429 SHMT-like_dom 238 449
No external refs found!