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  5. Sam_g27422

Sam_g27422


Description : not classified & original description: none


Gene families : OG0005693 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005693_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g27422

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00237300 SCY2, EMB2289,... Protein translocation.chloroplast.inner envelope Sec2... 0.02 OrthoFinder output from all 47 species
Aev_g14529 SCY2, EMB2289 component *(SecY2) of inner envelope Sec2 post-import... 0.02 OrthoFinder output from all 47 species
Ehy_g21095 SCY2, EMB2289 component *(SecY2) of inner envelope Sec2 post-import... 0.02 OrthoFinder output from all 47 species
LOC_Os05g33020.1 SCY2, EMB2289,... component SecY2 of inner envelope Sec2 post-import... 0.02 OrthoFinder output from all 47 species
Lfl_g26069 SCY2, EMB2289 component *(SecY2) of inner envelope Sec2 post-import... 0.04 OrthoFinder output from all 47 species
MA_502892g0010 SCY2, EMB2289 Preprotein translocase subunit SCY2, chloroplastic... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0260.g026890 No alias not classified & original description: CDS=1-420 0.02 OrthoFinder output from all 47 species
Spa_g30065 SCY2, EMB2289 component *(SecY2) of inner envelope Sec2 post-import... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!