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  5. Sam_g27279

Sam_g27279


Description : calcium sensor *(CML) & original description: none


Gene families : OG0000042 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g27279

Target Alias Description ECC score Gene Family Method Actions
Als_g12490 CPK17 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Aop_g12590 CPK34 EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
LOC_Os03g57450.1 CPK1, ATCPK1,... protein kinase (CDPK) 0.01 OrthoFinder output from all 47 species
LOC_Os04g49510.1 CPK5, ATCPK5,... protein kinase (CDPK) 0.01 OrthoFinder output from all 47 species
LOC_Os06g03682.1 PEPKR1, LOC_Os06g03682 protein kinase (PEPRK) 0.03 OrthoFinder output from all 47 species
LOC_Os11g07040.1 ATCPK4, CPK4,... protein kinase (CDPK) 0.05 OrthoFinder output from all 47 species
Mp3g02440.1 CPK5, ATCPK5 protein kinase (CDPK) 0.02 OrthoFinder output from all 47 species
Mp3g22080.1 CPK17 protein kinase (CDPK) 0.02 OrthoFinder output from all 47 species
Pnu_g26000 CPK1, ATCPK1 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Tin_g40352 CPK17 EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Tin_g41524 CPK17 EC_2.7 transferase transferring phosphorus-containing... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 69 129
IPR002048 EF_hand_dom 139 201
No external refs found!