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  5. Sam_g27080

Sam_g27080


Description : amino acid transporter *(AAP) & original description: none


Gene families : OG0000260 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000260_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g27080
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AT1G58360 NAT2, AAP1 amino acid permease 1 0.03 OrthoFinder output from all 47 species
AT5G63850 AAP4 amino acid permease 4 0.04 OrthoFinder output from all 47 species
Ala_g26182 AAP6 amino acid transporter *(AAP) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01022321001 AAP2 Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
GSVIVT01035302001 NAT2, AAP1 Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
Lfl_g01512 AAP3, ATAAP3 amino acid transporter *(AAP) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03880 AAP3, ATAAP3 amino acid transporter *(AAP) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24798 AAP3, ATAAP3 amino acid transporter *(AAP) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13583 AAP3, ATAAP3 amino acid transporter *(AAP) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g16113 AAP3, ATAAP3 amino acid transporter *(AAP) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07832 No alias amino acid transporter *(AAP) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019058_P001 AAP3, ATAAP3,... amino acid transporter (AAP) 0.02 OrthoFinder output from all 47 species
Zm00001e027030_P001 AAP3, ATAAP3,... amino acid transporter (AAP) 0.03 OrthoFinder output from all 47 species
Zm00001e037229_P001 AAP6, Zm00001e037229 amino acid transporter (AAP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072488 ammonium transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 94 532
No external refs found!