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  5. Sam_g27077

Sam_g27077


Description : substrate adaptor *(FBL17) of SCF E3 ubiquitin ligase complex & original description: none


Gene families : OG0009459 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009459_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g27077
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
Aob_g32260 FBL17 substrate adaptor *(FBL17) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Azfi_s0330.g065373 FBL17 substrate adaptor *(FBL17) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ceric.12G083400.1 FBL17, Ceric.12G083400 substrate adaptor *(FBL17) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
LOC_Os12g40860.1 FBL17, LOC_Os12g40860 component FBX of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species
Solyc09g065880.4.1 FBL17, Solyc09g065880 component FBX of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species
Zm00001e018050_P001 FBL17, Zm00001e018050 component FBX of SCF E3 ubiquitin ligase complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 192 230
No external refs found!