Lfl_g28060


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g28060

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00035580 No alias Pentatricopeptide repeat-containing protein At5g44230... 0.02 OrthoFinder output from all 47 species
AT4G39952 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g003783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003796 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g005602 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g019220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g025357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036438 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g123560 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12585 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g19430 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20488 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26222 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33506 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g35870 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04818 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06199 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07262 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07482 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14743 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g15743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16090 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18405 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18506 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19301 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19303 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22752 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26561 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30496 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30533 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31230 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g55080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09742 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15693 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16819 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37147.t1 Aspi01Gene37147 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41379.t1 Aspi01Gene41379 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69580.t1 Aspi01Gene69580 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g011042 No alias not classified & original description: CDS=1-2970 0.03 OrthoFinder output from all 47 species
Azfi_s0061.g034904 No alias not classified & original description: CDS=1-1944 0.03 OrthoFinder output from all 47 species
Cba_g03910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07194 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g17193 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20506 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g30006 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g37951 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g72353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.39G046500.1 Ceric.39G046500 not classified & original description: pacid=50582543... 0.02 OrthoFinder output from all 47 species
Dac_g14700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08400 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11166 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g20520 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g21324 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g36065 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g36357 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g38628 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g38659 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40897 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g44864 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g45907 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g46395 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g46754 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g27009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g23295 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g63560.1 LOC_Os03g63560 OTP70 plastidial RNA splicing factor 0.02 OrthoFinder output from all 47 species
LOC_Os09g07780.1 OTP84, LOC_Os09g07780 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
LOC_Os10g39460.2 LOC_Os10g39460 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Lfl_g05722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07406 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07755 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07816 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08047 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41122 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23872 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25096 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09754 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15077 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01026 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g28912 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04516 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g15168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05592 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15472 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g33298 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g36021 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g48204 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53946 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61267 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005124 No alias not classified & original description: CDS=63-833 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014492 No alias not classified & original description: CDS=1-2247 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019387 REME1 not classified & original description: CDS=1-1161 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022190 No alias not classified & original description: CDS=1-2487 0.03 OrthoFinder output from all 47 species
Sam_g40204 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14333 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55575 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02687 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06083 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17781 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g18985 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 552 573
IPR002885 Pentatricopeptide_repeat 478 508
IPR002885 Pentatricopeptide_repeat 377 407
IPR002885 Pentatricopeptide_repeat 349 372
IPR002885 Pentatricopeptide_repeat 581 608
IPR002885 Pentatricopeptide_repeat 172 219
IPR002885 Pentatricopeptide_repeat 71 118
IPR002885 Pentatricopeptide_repeat 273 321
No external refs found!