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  5. Sam_g26899

Sam_g26899


Description : ubiquitin-proteasome shuttle factor *(RAD23) & original description: none


Gene families : OG0001068 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001068_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g26899

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene26689.t1 RAD23B, RAD23,... ubiquitin-proteasome shuttle factor *(RAD23) & original... 0.02 OrthoFinder output from all 47 species
Dac_g33380 RAD23B, RAD23 ubiquitin-proteasome shuttle factor *(RAD23) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g03423 RAD23D ubiquitin-proteasome shuttle factor *(RAD23) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g07510 RAD23-3, RAD23C ubiquitin-proteasome shuttle factor *(RAD23) & original... 0.02 OrthoFinder output from all 47 species
LOC_Os08g33340.1 RAD23D, LOC_Os08g33340 shuttle protein (RAD23) 0.02 OrthoFinder output from all 47 species
Msp_g25011 RAD23B, RAD23 ubiquitin-proteasome shuttle factor *(RAD23) & original... 0.03 OrthoFinder output from all 47 species
Ore_g27319 RAD23-3, RAD23C ubiquitin-proteasome shuttle factor *(RAD23) & original... 0.02 OrthoFinder output from all 47 species
Pp3c18_16750V3.1 RAD23A, Pp3c18_16750 Rad23 UV excision repair protein family 0.01 OrthoFinder output from all 47 species
Solyc04g007120.4.1 RAD23-3, RAD23C,... shuttle protein (RAD23) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR015360 XPC-bd 343 399
IPR015940 UBA 232 266
IPR015940 UBA 425 460
IPR000626 Ubiquitin-like_dom 68 141
No external refs found!