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  5. Sam_g26650

Sam_g26650


Description : E3 ubiquitin ligase *(XBAT3) & original description: none


Gene families : OG0001126 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001126_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g26650
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
Ala_g26855 XBAT35 E3 ubiquitin ligase *(XBAT3) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g14150 XBAT35 E3 ubiquitin ligase *(XBAT3) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.14G022000.1 XBAT34, Ceric.14G022000 E3 ubiquitin ligase *(XBAT3) & original description:... 0.02 OrthoFinder output from all 47 species
Ehy_g17937 XBAT35 E3 ubiquitin ligase *(XBAT3) & original description: none 0.02 OrthoFinder output from all 47 species
MA_105066g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Nbi_g20190 XBAT35 E3 ubiquitin ligase *(XBAT3) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16621 XBAT35 E3 ubiquitin ligase *(XBAT3) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g07864 XBAT35 E3 ubiquitin ligase *(XBAT3) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g18980 XBAT35 E3 ubiquitin ligase *(XBAT3) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16771 XBAT35 E3 ubiquitin ligase *(XBAT3) & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008875 XBAT35 E3 ubiquitin ligase *(XBAT3) & original description: CDS=669-2021 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0103.g020003 XBAT35 E3 ubiquitin ligase *(XBAT3) & original description: CDS=87-1412 0.02 OrthoFinder output from all 47 species
Spa_g26255 XBAT35 E3 ubiquitin ligase *(XBAT3) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 58 128
No external refs found!