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  5. Sam_g26642

Sam_g26642


Description : proton:sodium cation antiporter *(NHX) & original description: none


Gene families : OG0000899 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000899_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g26642

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00134170 AT-NHX1, ATNHX1,... Solute transport.carrier-mediated transport.CPA... 0.02 OrthoFinder output from all 47 species
AT5G27150 AT-NHX1, ATNHX1,... Na+/H+ exchanger 1 0.03 OrthoFinder output from all 47 species
Dac_g22353 NHX2, ATNHX2 proton:sodium cation antiporter *(NHX) & original... 0.05 OrthoFinder output from all 47 species
Dcu_g13080 NHX3, ATNHX3 proton:sodium cation antiporter *(NHX) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01000002001 AT-NHX1, ATNHX1,... Solute transport.carrier-mediated transport.CPA... 0.02 OrthoFinder output from all 47 species
LOC_Os11g42790.1 NHX2, ATNHX2,... proton:sodium cation antiporter (NHX) 0.02 OrthoFinder output from all 47 species
Msp_g06133 AT-NHX1, ATNHX1,... proton:sodium cation antiporter *(NHX) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006812 monoatomic cation transport IEA Interproscan
MF GO:0015299 obsolete solute:proton antiporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006153 Cation/H_exchanger 30 442
No external refs found!