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  5. Sam_g26533

Sam_g26533


Description : E1 ubiquitin-activating enzyme & original description: none


Gene families : OG0000675 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000675_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g26533

Target Alias Description ECC score Gene Family Method Actions
MA_10436331g0010 UBA1, MOS5, ATUBA1 Ubiquitin-activating enzyme E1 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pir_g43046 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g23497 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000112 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description:... 0.03 OrthoFinder output from all 47 species
Smo145914 UBA1, MOS5, ATUBA1 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR032418 E1_FCCH 225 295
IPR000594 ThiF_NAD_FAD-bd 51 434
IPR018965 Ub-activating_enz_E1_C 958 1047
IPR032420 E1_4HB 296 366
IPR019572 UBA_E1_SCCH 635 888
IPR000594 ThiF_NAD_FAD-bd 448 942
No external refs found!