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  5. Sam_g26394

Sam_g26394


Description : metal ion-chelate reductase *(FRO) & original description: none


Gene families : OG0000835 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000835_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g26394

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00254670 ATFRO2, FRO2,... Nutrient uptake.copper uptake.reduction-based uptake.FRO... 0.02 OrthoFinder output from all 47 species
Lfl_g28715 ATFRO6, FRO6 metal ion-chelate reductase *(FRO) & original description: none 0.02 OrthoFinder output from all 47 species
Smo113141 FRO7, ATFRO7 Nutrient uptake.copper uptake.reduction-based uptake.FRO... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013130 Fe3_Rdtase_TM_dom 12 62
IPR013112 FAD-bd_8 133 212
IPR013121 Fe_red_NAD-bd_6 220 526
No external refs found!